The detailed information of tRNA gene sequence


Sequence ID>WENV180098998
Genome IDMTBK01280939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 59246
End posion on genome 59151
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttcggcaagt
tRNA gene sequence 
GGGGGTAGTTAGCGGCCTGGTGGCGCTCCTGGACTTCAAATCCAGTGGTGGGCCTGAAAA
GTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
gacaagtgca
Secondary structure (Cloverleaf model)
>WENV180098998	SeC	TCA
                   t      GCCA gacaagtgca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C C G        T      + | | | |     G
    T       G C G A       G T G G G     C
    G       | | | |                 T T
    G       C G C T
      T G G        C     TGGTGGGCCTGAAAAGTCCACG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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