The detailed information of tRNA gene sequence


Sequence ID>WENV180099000
Genome IDMTBK01281072
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 490
End posion on genome 564
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctcgcagagt
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACTTCGTTCACACCGAAGGGGTCACAGGTTCGATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
ttccctccct
Secondary structure (Cloverleaf model)
>WENV180099000	Val	CAC
                   t      ACCA ttccctccct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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