The detailed information of tRNA gene sequence


Sequence ID>WENV180099001
Genome IDMTBK01281145
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 478
End posion on genome 403
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agttatttta
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCTGGCTCATAACCAGGCGGTCGTGGGTTCAA
ATCCCTCCGGGCCCACtg
Downstream region at tRNA end position 
atttttgcgc
Secondary structure (Cloverleaf model)
>WENV180099001	Met	CAT
                   a      ACtg atttttgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      |   | | |     A
  C         T T C G       G T G G G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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