The detailed information of tRNA gene sequence


Sequence ID>WENV180099003
Genome IDMTBK01281219
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 51
End posion on genome 142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggagattg
tRNA gene sequence 
GGAAGGGTGCTTGAGTGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGCTTTGCCGCC
CTCCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ttaaaaagcg
Secondary structure (Cloverleaf model)
>WENV180099003	Ser	GCT
                   g      GCCA ttaaaaagcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGCTTTGCCGCCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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