The detailed information of tRNA gene sequence


Sequence ID>WENV180099007
Genome IDMTBK01281700
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2517
End posion on genome 2442
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttatgcttT
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCGTGGGTTCGAG
TCCCTCCGCGCCCATtt
Downstream region at tRNA end position 
tttgtttaaa
Secondary structure (Cloverleaf model)
>WENV180099007	Val	CAC
                   T      ATtt tttgtttaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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