The detailed information of tRNA gene sequence


Sequence ID>WENV180099024
Genome IDMTBK01282695
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11733
End posion on genome 11808
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tggattagcg
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGAAGAGCGGCCGGCTCATAACCGGTTGGTCCCAGGTTCGAGC
CCTGGTGGGCCCACCA
Downstream region at tRNA end position 
aatcatggcc
Secondary structure (Cloverleaf model)
>WENV180099024	Ile2	CAT
                   g      ACCA aatcatggcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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