The detailed information of tRNA gene sequence


Sequence ID>WENV180099030
Genome IDMTBK01282989
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1899
End posion on genome 1812
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catcgtcggc
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGACGGTCTCGAAAACCGTTGAGGTTACGGCCTCC
GGGGGTTCGAATCCCCCACTCTCCGCCA
Downstream region at tRNA end position 
caggaccctc
Secondary structure (Cloverleaf model)
>WENV180099030	Ser	CGA
                   c      GCCA caggaccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAGGTTACGGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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