The detailed information of tRNA gene sequence


Sequence ID>WENV180099041
Genome IDMTBK01283647
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3131
End posion on genome 3205
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
taaaaaacac
tRNA gene sequence 
TCCCCAGTAGCTCAGCTGGTTAGAGCGGCGGACTGTTAATCCGTAGGTCGTAGGTTCAAG
TCCTACCTGGGGAGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180099041	Asn	GTT
                   c      GCnn nnnnnnnnnn
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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