The detailed information of tRNA gene sequence


Sequence ID>WENV180099043
Genome IDMTBK01283787
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 304
End posion on genome 209
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtagatcgac
tRNA gene sequence 
GGAAGGGCAACCATCCTGGTGGGTGGGCCGGGCTTCAAACCCGGTGGGTGGCGCCAAGCG
CCGCCGGGTGGGTTCGACTCCCATGCCCTTCCGCCA
Downstream region at tRNA end position 
gtcccgcgcc
Secondary structure (Cloverleaf model)
>WENV180099043	SeC	TCA
                   c      GCCA gtcccgcgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    A     T A C C C     A
      T C C        A      + | | | |     G
    G       T A C C       G T G G G     C
    G       + | | |                 T T
    T       G T G G
      G G          G     TGGGTGGCGCCAAGCGCCGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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