The detailed information of tRNA gene sequence


Sequence ID>WENV180099048
Genome IDMTBK01284039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 582
End posion on genome 667
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttgctctC
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGTCGATGGAGGCGGTCTTGAAAACCGTTGGGTTCATAGCCCCG
GGGGTTCGAATCCCTCACTCTCCGAtt
Downstream region at tRNA end position 
atttttttat
Secondary structure (Cloverleaf model)
>WENV180099048	Ser	TGA
                   C      GAtt atttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | | |                 T T
    T       T G G A
      C G A        G     TGGGTTCATAGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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