The detailed information of tRNA gene sequence


Sequence ID>WENV180099049
Genome IDMTBK01284039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 691
End posion on genome 778
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcatagagcT
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCCGAAGGGGGTTGCCTGCTAAGCAATTGTATCGTTTAGGTAC
CGGGGGTTCGAATCCCCCCTTCTCCGAat
Downstream region at tRNA end position 
gagttaaaat
Secondary structure (Cloverleaf model)
>WENV180099049	Ser	GCT
                   T      GAat gagttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTATCGTTTAGGTACC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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