The detailed information of tRNA gene sequence


Sequence ID>WENV180099059
Genome IDMTBK01284876
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 149
End posion on genome 62
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtagggaaaa
tRNA gene sequence 
GCCGGGGTGTTGGAACAGGTAGACAATGGGGACTTAAAATCCCTTGGGCTTTGAGCCCGT
GCGGGTTCGAATCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
tcacgtaacc
Secondary structure (Cloverleaf model)
>WENV180099059	Leu	TAA
                   a      ACCA tcacgtaacc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C A A        G      | | | | |     G
    A       G G T T       G C G G G     C
    G         | | |                 T T
    G       A C A A
      T A G        T     TGGGCTTTGAGCCCGT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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