The detailed information of tRNA gene sequence


Sequence ID>WENV180099060
Genome IDMTBK01284931
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1223
End posion on genome 1299
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tctgcctctt
tRNA gene sequence 
CGGCGTGTAGCGTAGCCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGAGTTCGAA
TCTCTCCACGCCGACCA
Downstream region at tRNA end position 
gtttttttgg
Secondary structure (Cloverleaf model)
>WENV180099060	Pro	TGG
                   t      ACCA gtttttttgg
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       T G C G       G G G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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