The detailed information of tRNA gene sequence


Sequence ID>WENV180099064
Genome IDMTBK01284975
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 260
End posion on genome 185
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggcttatttT
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCACTTGGTTCGGGACTAAGTGGTCGGAGGTTCAAA
TCCTCTCACTCCGATtt
Downstream region at tRNA end position 
aaaaaattaa
Secondary structure (Cloverleaf model)
>WENV180099064	Pro	CGG
                   T      ATtt aaaaaattaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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