The detailed information of tRNA gene sequence


Sequence ID>WENV180099067
Genome IDMTBK01285360
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1186
End posion on genome 1102
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnntttcat
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGCTAGTTTCAGGGACTAGTATTCGCAAGGATGTG
CAGGTTCAAGTCCTGTTCCGGGCACaa
Downstream region at tRNA end position 
gcaaaaaacc
Secondary structure (Cloverleaf model)
>WENV180099067	Leu	CAG
                   t      ACaa gcaaaaaacc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATTCGCAAGGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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