The detailed information of tRNA gene sequence


Sequence ID>WENV180099069
Genome IDMTBK01285467
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3587
End posion on genome 3663
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttttattat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
ataaaacatg
Secondary structure (Cloverleaf model)
>WENV180099069	fMet	CAT
                   t      ACCA ataaaacatg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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