The detailed information of tRNA gene sequence


Sequence ID>WENV180099070
Genome IDMTBK01285613
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1386
End posion on genome 1310
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
catccgcttc
tRNA gene sequence 
GGGCGTATAGCTCAGTTGGTTAGAGCGCTACCTTGACACGGTAGAGGTCTCCGGTTCGAG
TCCGGCTACGCCCACCA
Downstream region at tRNA end position 
atagcgccgg
Secondary structure (Cloverleaf model)
>WENV180099070	Val	GAC
                   c      ACCA atagcgccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     C G G C C     A
      T G A        A        | | | |     G
    T       C T C G       T C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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