The detailed information of tRNA gene sequence


Sequence ID>WENV180099072
Genome IDMTBK01285747
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 785
End posion on genome 878
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcactgcgc
tRNA gene sequence 
GGAGTGGTGTCCGAGTTGGCTTAAGGAGCACGACTGGAAATCGTGTAGGCGGGGGTAACT
CGTCTCGAGGGTTCGAATCCCTCCCACTCCGCCA
Downstream region at tRNA end position 
tcttctcgnn
Secondary structure (Cloverleaf model)
>WENV180099072	Ser	GGA
                   c      GCCA tcttctcgnn
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T T A          G     TAGGCGGGGGTAACTCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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