The detailed information of tRNA gene sequence


Sequence ID>WENV180099080
Genome IDMTBK01286326
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1797
End posion on genome 1873
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccattttttc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCTACCGGCTCATAACCGGTCGGTCCCTGGTTCGAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
tttttaaaat
Secondary structure (Cloverleaf model)
>WENV180099080	Ile2	CAT
                   c      ACCA tttttaaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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