The detailed information of tRNA gene sequence


Sequence ID>WENV180099084
Genome IDMTBK01286735
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 488
End posion on genome 412
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcccagagc
tRNA gene sequence 
GGGGTCGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
CCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV180099084	Asp	GTC
                   c      GCCA ttttattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          C G
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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