The detailed information of tRNA gene sequence


Sequence ID>WENV180099088
Genome IDMTBK01287044
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 138
End posion on genome 215
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgaaattcta
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTTAGCGCACTGGTTTTGGGAACCAGGTGTCGGAGGTTCGA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gagtttacca
Secondary structure (Cloverleaf model)
>WENV180099088	Pro	TGG
                   a      ACCA gagtttacca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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