The detailed information of tRNA gene sequence


Sequence ID>WENV180099089
Genome IDMTBK01287044
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 233
End posion on genome 308
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccacgaaagt
tRNA gene sequence 
GGGCGTTTAGCTCAGCTGGAAGAGCGCTTGCCTTACAAGCAAGATGTCGGCGGTTCAAGT
CCGTCAACGCCCACCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV180099089	Val	TAC
                   t      ACCA ttttttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T G
                    T     C T G C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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