The detailed information of tRNA gene sequence


Sequence ID>WENV180099093
Genome IDMTBK01287393
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 875
End posion on genome 802
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttaatt
tRNA gene sequence 
GGCGACGTACCCAAGTGGCTAAGGGAGCGGTCTGCAAAACCGTTATGCACCGGTTCAAGT
CCGGTCGTCGCCTCtg
Downstream region at tRNA end position 
atttgagcag
Secondary structure (Cloverleaf model)
>WENV180099093	Cys	GCA
                   t      TCtg atttgagcag
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    G       A C C C       A C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     TATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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