The detailed information of tRNA gene sequence


Sequence ID>WENV180099094
Genome IDMTBK01287393
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 768
End posion on genome 683
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agttcatttt
tRNA gene sequence 
GCCGAAGTGGCGGAAATGGTAGACGCAAGGGACTTAAAATCCCTCGATCCTTTGGATCGT
GCCGGTTCGATTCCGGCCTTCGGCACaa
Downstream region at tRNA end position 
ctttcataat
Secondary structure (Cloverleaf model)
>WENV180099094	Leu	TAA
                   t      ACaa ctttcataat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G G C C     A
      A A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGATCCTTTGGATCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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