The detailed information of tRNA gene sequence


Sequence ID>WENV180099096
Genome IDMTBK01287417
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 856
End posion on genome 782
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taataaagtt
tRNA gene sequence 
GGTCGCATAGCTCAGTTGGTTAGAGCGCACGATTCACATTCGTGAGGTCCCAGGTTCGAG
TCCTGGTGCGACCACgt
Downstream region at tRNA end position 
tgtttttcat
Secondary structure (Cloverleaf model)
>WENV180099096	Val	CAC
                   t      ACgt tgtttttcat
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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