The detailed information of tRNA gene sequence


Sequence ID>WENV180099101
Genome IDMTBK01287951
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2999
End posion on genome 2904
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accttggcgt
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGTCGAAGGCGCTCGCCTGGAAAGCGAGTAGACGGGGCAAAAC
CTCGTCTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatgat
Secondary structure (Cloverleaf model)
>WENV180099101	Ser	GGA
                   t      GCCA tttttatgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGACGGGGCAAAACCTCGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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