The detailed information of tRNA gene sequence


Sequence ID>WENV180099102
Genome IDMTBK01288109
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1743
End posion on genome 1655
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
caatagccgt
tRNA gene sequence 
GCGGGCGTGGCGGAACTGGCAGACGCGCTGGACTTAGGATCCAGTGGGATAACTTTCCCT
TGGAGGTTCAAATCCTCTCGCCCGCACCA
Downstream region at tRNA end position 
ttttttgtaa
Secondary structure (Cloverleaf model)
>WENV180099102	Leu	TAG
                   t      ACCA ttttttgtaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGATAACTTTCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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