The detailed information of tRNA gene sequence


Sequence ID>WENV180099111
Genome IDMTBK01289103
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 782
End posion on genome 709
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaaattgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAGGTTCGAAT
CCTACCCCCGCTACaa
Downstream region at tRNA end position 
attaatttaa
Secondary structure (Cloverleaf model)
>WENV180099111	fMet	CAT
                   t      ACaa attaatttaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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