The detailed information of tRNA gene sequence


Sequence ID>WENV180099114
Genome IDMTBK01289133
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1336
End posion on genome 1411
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgtttgc
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAATCGGGTGCTGCAGGTTCAAGT
CCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
agtttgtttg
Secondary structure (Cloverleaf model)
>WENV180099114	Trp	CCA
                   c      GCCA agtttgtttg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGCT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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