The detailed information of tRNA gene sequence


Sequence ID>WENV180099115
Genome IDMTBK01289181
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 583
End posion on genome 512
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaccccaat
tRNA gene sequence 
GGGCGATTAGTTTAATGGTAGAACAACGGTCTCCAAAACCGTTGGTGGGAGTTCGATTCT
TCCATCGCCCGCaa
Downstream region at tRNA end position 
aaatacagag
Secondary structure (Cloverleaf model)
>WENV180099115	Trp	CCA
                   t      GCaa aaatacagag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     C C T T C     A
        A A        A      | | + | |     G
      T     T T T G       G G G A G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     TGGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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