The detailed information of tRNA gene sequence


Sequence ID>WENV180099210
Genome IDNKAJ01000396
Search identical group
Phylum/Class[NKAJ] marine sediment metagenome; Jiulong cold seep at northern South China Sea
Species
Start position on genome 2417
End posion on genome 2332
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggaattatt
tRNA gene sequence 
GACGAGATAGCCAAGCCTGGTATGGCGCAGGATTGCTAATCCTGTGGTCGTTTTGACCTC
GGGGGTTCGAATCCCCCTCTCGTCGCtt
Downstream region at tRNA end position 
atttacctaa
Secondary structure (Cloverleaf model)
>WENV180099210	Ser	GCT
                   t      GCtt atttacctaa
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGGTCGTTTTGACCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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