The detailed information of tRNA gene sequence


Sequence ID>WENV180111447
Genome IDOAPN01083590
Search identical group
Phylum/Class[OAPN] marine metagenome; 2011
Species
Start position on genome 238
End posion on genome 143
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccctcatggc
tRNA gene sequence 
GGGGGCGTACGAGTACCTGGTGGGCTTCACTGTCTTCAACACAGTTGGAACGGGCGATCC
CCGTTCGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
ctcaccattt
Secondary structure (Cloverleaf model)
>WENV180111447	SeC	TCA
                   c      GCCA ctcaccattt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | +                 T T
    G       G C T T
      T G G        C     TGGAACGGGCGATCCCCGTTCG
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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