The detailed information of tRNA gene sequence


Sequence ID>w007199
Genome IDAAIK01000014
Search identical group
Phylum/ClassChlorobiota
SpeciesPelodictyon phaeoclathratiforme BU-1 [AAIK]
Start position on genome 38926
End posion on genome 38839
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcagataaT
tRNA gene sequence 
GGAGGATTTGCCTAATTGGTAAGGCAGCAGTCTTGAAAACTGCCGGGTTCACGCCCATGG
GGGTTCGAGTCCCTCATCCTCCGCAG
Downstream region at tRNA end position 
Catcaccctg
Secondary structure (Cloverleaf model)
>w007199	Ser	TGA
                   T      GCAG Catcaccctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      T A A        T      | + | | |     G
    T       T C C G       G G G G G     C
    G       | | | |                 T T
    G       A G G C
      T A          A     CGGGTTCACGCCCAT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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