The detailed information of tRNA gene sequence


Sequence ID>WENV180162670
Genome IDOAVH01000029
Search identical group
Phylum/Class[OAVH] human gut metagenome; faeces
Species
Start position on genome 59886
End posion on genome 59983
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatgatttat
tRNA gene sequence 
GGATGTCGTTGGGTAACTGGTGTGCCCCCTGGTCTTCAAAACCTGTGCTGGACGTTAAGA
GCGCCCTGGGTGAGTTCGATTCTCACAGGCATCCGCCA
Downstream region at tRNA end position 
aaaaaaactg
Secondary structure (Cloverleaf model)
>WENV180162670	SeC	TCA
                   t      GCCA aaaaaaactg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T + G
                     C - G
                     G   A          T T
                    T     C A C T C     A
      C A A        T      | | | | |     G
    T       T G G G       G T G A G     C
    G       + | | |                 T T
    G       G C C C
      T G T        C     TGCTGGACGTTAAGAGCGCCCTGG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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