The detailed information of tRNA gene sequence


Sequence ID>WENV180239406
Genome IDOBDB01003644
Search identical group
Phylum/Class[OBDB] human gut metagenome; human gut
Species
Start position on genome 1614
End posion on genome 1518
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctctcacat
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGCCCCCCGGTCTTCAAAACCGGTGAGAGGGGTGAAGAG
CCTCTCGGGTGAGTTCGATTCTCACATGCTCCCGCCA
Downstream region at tRNA end position 
gagcctcgcg
Secondary structure (Cloverleaf model)
>WENV180239406	SeC	TCA
                   t      GCCA gagcctcgcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C T C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G A G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGAGAGGGGTGAAGAGCCTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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