The detailed information of tRNA gene sequence


Sequence ID>WENV180248156
Genome IDOBEQ010088583
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 13234
End posion on genome 13145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggccttatt
tRNA gene sequence 
GGAAGAGTGCCCCGAATGGTAAGGGAGCGGTTTGCTAAACCGTAGTCGTCTAAAAAGCGA
CTTGTGGGTTCAAGTCCCACCTCTTCCGCCg
Downstream region at tRNA end position 
aagtccgcga
Secondary structure (Cloverleaf model)
>WENV180248156	Ser	GCT
                   t      GCCg aagtccgcga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      A A G        G      | | | | |     A
    T       C C C C       G T G G G     C
    G         | | |                 T T
    G       A G G G
      T A          A     AGTCGTCTAAAAAGCGACTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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