The detailed information of tRNA gene sequence


Sequence ID>WENV180248214
Genome IDOBEQ010093235
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 898
End posion on genome 987
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgggcaact
tRNA gene sequence 
GGAGAGGTCTCATAGTGGCCGAGTGCTGGGCAGTGCTAATGCCCCATACCCGTAAGGTTA
TCGTGGGTTCGAATCCAACCTTCTCCGCCA
Downstream region at tRNA end position 
tggaggaatt
Secondary structure (Cloverleaf model)
>WENV180248214	Ser	GCT
                   t      GCCA tggaggaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A A C C     A
      T G A        C      | |   | |     G
    G       T A C T       G T G G G     C
    G       + | |                   T T
    C       G T G C
      C G A        T     CATACCCGTAAGGTTATC
                    G - C
                    G - C
                    G - C
                    C - G
                    A - T
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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