The detailed information of tRNA gene sequence


Sequence ID>WENV180248360
Genome IDOBEQ010103448
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 1781
End posion on genome 1694
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtgtaaagc
tRNA gene sequence 
GGTGGAGTGGCTGAGTGGTCGAAAGCGCCACACTCGAGATGTGGTGTGCTCGAAAGGGCA
CCGTGAGTTCGAATCTCACCCCCACTGCtt
Downstream region at tRNA end position 
tattcgagaa
Secondary structure (Cloverleaf model)
>WENV180248360	Ser	CGA
                   c      GCtt tattcgagaa
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     A   C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGCTCGAAAGGGCACC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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