The detailed information of tRNA gene sequence


Sequence ID>WENV180250289
Genome IDOBEQ010271790
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 3252
End posion on genome 3176
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgaacattag
tRNA gene sequence 
AGGCCAGTAGCTCTAATCGGCAGAGCATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gcacaatcaa
Secondary structure (Cloverleaf model)
>WENV180250289	Trp	CCA
                   g      GCCA gcacaatcaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    C       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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