The detailed information of tRNA gene sequence


Sequence ID>WENV180250993
Genome IDOBEQ010330351
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 523
End posion on genome 428
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gatttgtgca
tRNA gene sequence 
cGGAGAGGATGATGGCCCGGTGGCATTCTCGGGCTTCAAATCCGATGGGAGGCAGAAAAC
CTGTCTCTGGTAGGTTCGACTCCTACACTCTCCGCCAt
Downstream region at tRNA end position 
ttccttgcgc
Secondary structure (Cloverleaf model)
>WENV180250993	SeC	TCA
                   a      CCAt ttccttgcgc
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G   A          T C
                    A     C A T C C     A
      C C G        T      | | | | |     G
    C       G T A G       G T A G G     C
    G       | | | +                 T T
    G       C A T T
      T G G        C     TGGGAGGCAGAAAACCTGTCTCTG
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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