The detailed information of tRNA gene sequence


Sequence ID>WENV180251339
Genome IDOBEQ010359306
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 290
End posion on genome 379
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acatggccgt
tRNA gene sequence 
GGAGCGATGCCGGAGTCTGGTTGATCGGGCTTGTCTTGAAAACAAGAGACCTCGCAAGGG
GTCCGGGGGTTCAAATCCCTCTCGCTCCGCgt
Downstream region at tRNA end position 
ggatgtatta
Secondary structure (Cloverleaf model)
>WENV180251339	Ser	TGA
                   t      GCgt ggatgtatta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     A
  T         G G C C       G G G G G     C
  G         + | | |                 T T
  G         T C G G
    T T G A        G     AGACCTCGCAAGGGGTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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