The detailed information of tRNA gene sequence


Sequence ID>WENV180251787
Genome IDOBEQ010393734
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 1083
End posion on genome 1171
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gataattaaa
tRNA gene sequence 
GGAGGCGTGCTAGAGCGGTCTAATAGGACACGGTGCTAACGTGTTAAGGGACAAAATCCC
TTCGGAGGTTCGAATCCTCCCGCCTCCGCaa
Downstream region at tRNA end position 
aaatccgaac
Secondary structure (Cloverleaf model)
>WENV180251787	Ser	GCT
                   a      GCaa aaatccgaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     G
    G       G A T C       G G A G G     C
    G         | | |                 T T
    T       A T A G
      C T A        G     TAAGGGACAAAATCCCTTC
                    A - T
                    C - G
                    A - T
                    C - G
                    G - C
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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