The detailed information of tRNA gene sequence


Sequence ID>WENV180252034
Genome IDOBEQ010413198
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 5597
End posion on genome 5686
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgatgttct
tRNA gene sequence 
GGAGAGATGCGAGAGTGGCTGAATCGGCACGATTGGAAATCGTGAAGGCCCGCAAGGGCC
TCTTGGGTTCGAATCCCAATCTCTCCGCCA
Downstream region at tRNA end position 
tgcactcgtt
Secondary structure (Cloverleaf model)
>WENV180252034	Ser	GGA
                   t      GCCA tgcactcgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       T T G G G     C
    G         | | |                 T T
    C       A T C G
      T G A        G     AAGGCCCGCAAGGGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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