The detailed information of tRNA gene sequence


Sequence ID>WENV180252525
Genome IDOBEQ010457563
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 520
End posion on genome 617
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggctgcgggc
tRNA gene sequence 
GGGAGTGGATGGGTCCCGGTGGGTCTCGCGGTCTTCAACACCGTTGCGGGGCGGCCTACG
CCGTCCCGGGAGGGTTCGACTCCCTCGCACTCCCGCCA
Downstream region at tRNA end position 
cgatgtcgat
Secondary structure (Cloverleaf model)
>WENV180252525	SeC	TCA
                   c      GCCA cgatgtcgat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C T C C C     A
      C C C        T      | | | | |     G
    G       T G G G       G A G G G     C
    G       + + | +                 T T
    T       G T C T
      G G          C     TGCGGGGCGGCCTACGCCGTCCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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