The detailed information of tRNA gene sequence


Sequence ID>WENV180252648
Genome IDOBEQ010467971
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 325
End posion on genome 227
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGCGAAAAGGGTCCGGTGATCCTCCCGGCCTTCAAAGCCGGCGATTCGGTCCTTCGC
GGGTCGGATGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
gccctcgaga
Secondary structure (Cloverleaf model)
>WENV180252648	SeC	TCA
                   n      GCCA gccctcgaga
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C          C T
                    A     A C A C C     C
      C T G        A      | |   |       A
    C       G G A A       T G G G T     G
    G       + |   |                 T C
    G       T C C T
      T G A        C     CGATTCGGTCCTTCGCGGGTCGGATGG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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