The detailed information of tRNA gene sequence


Sequence ID>WENV180252853
Genome IDOBEQ010484314
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 178
End posion on genome 105
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cacccttcga
tRNA gene sequence 
GGGCCGGTAGCTCAATGGGAGAGCAGGTGGCTCATAACCACTTGGTCGGACGTTCGATCC
GTCCCCGGCCCACCc
Downstream region at tRNA end position 
acccagcact
Secondary structure (Cloverleaf model)
>WENV180252853	Ile2	CAT
                   a      ACCc acccagcact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          C T
                    T     C C T G C     A
        A A        A      | | | | |     G
      T     C T C G       G G A C G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     TGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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