The detailed information of tRNA gene sequence


Sequence ID>WENV180252861
Genome IDOBEQ010484682
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 545
End posion on genome 630
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
ccgatcgagc
tRNA gene sequence
GGAGAGGTCGCATAGTGGCCTAGTGCGCGGGTATCGAAAACCAATAACCCGCAATGGATC
GAGGGTTCTAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position
ggtcgaggaa
Secondary structure (Cloverleaf model)
>WENV180252861	Ser	CGA
                   c      GCtc ggtcgaggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     T
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAACCCGCAATGGATC
                    C   A
                    G   A
                    G - C
                    G - C
                    T - A
                  A       A
                  T       A *
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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