The detailed information of tRNA gene sequence


Sequence ID>WENV180253582
Genome IDOBEQ010555165
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 156
End posion on genome 60
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggtaaaaaat
tRNA gene sequence 
GGAAGAGAGGCGTTCCCCGGTGGGGCGGCCAGACTTCAAATCTGGCAAGGGCCGTCAGTC
GGTTCTTGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
tccccccggc
Secondary structure (Cloverleaf model)
>WENV180253582	SeC	TCA
                   t      GCCA tccccccggc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    G     C A C C C     A
      C C C        G      | | | | |     G
    C       T T G C       G T G G G     C
    G       + + | |                 T T
    G       G G C G
      T G G        G     CAAGGGCCGTCAGTCGGTTCTTG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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