The detailed information of tRNA gene sequence


Sequence ID>WENV180254526
Genome IDOBEQ010637909
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 1358
End posion on genome 1261
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttatcaatcc
tRNA gene sequence 
GGAGGCACATCCGTCACTGGTGGACGGCCCGGTCTTCAAAACCGGTGAGGGGGATGAGAA
ATCTCCCTGGTGGGTTCGATTCCCATGTGTCTCCGCCA
Downstream region at tRNA end position 
attacaatca
Secondary structure (Cloverleaf model)
>WENV180254526	SeC	TCA
                   c      GCCA attacaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T G C C       G T G G G     C
    G       | | | |                 T T
    G       A C G G
      T G G        C     TGAGGGGGATGAGAAATCTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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