The detailed information of tRNA gene sequence


Sequence ID>WENV180255204
Genome IDOBEQ010704823
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 867
End posion on genome 956
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagagttttt
tRNA gene sequence 
GGAGGAGTACCGAAGTGGTTGTAACGGGACCGTTTCGAAAGCGGTTGTAGGGTAAAACCT
ACCGTGGGTTCGAATCCCACCTCCTCCGCCt
Downstream region at tRNA end position 
tcgctcgacg
Secondary structure (Cloverleaf model)
>WENV180255204	Ser	CGA
                   t      GCCt tcgctcgacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  T         A C G G
    G T A          G     TGTAGGGTAAAACCTACC
                    A - T
                    C - G
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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